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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
ChIP-seq
Assay category
40
DNA binding
Target of assay
77
histone
77
histone modification
40
narrow histone mark
37
transcription factor
36
broad histone mark
6
RNA binding protein
5
control
3
chromatin remodeller
Date released
12
August, 2017
12
December, 2017
8
February, 2018
7
August, 2021
1
May, 2021
Available data
40
bam
40
bed narrowPeak
40
bigWig
32
fastq
8
tagAlign
5
bigBed narrowPeak
4
bed bed3+
Organism
40
Homo sapiens
Biosample type
239
tissue
112
primary cell
40
in vitro differentiated cells
19
cell line
1
stem cell
Organ
12
connective tissue
8
epithelium
7
embryo
5
liver
1
pancreas
Project
40
AMP
Genome assembly (visualization)
40
GRCh38
40
hg19
Lab
40
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
2
inconsistent control read length
files.file_type!
bed bedgraph
BIOSAMPLE
ASSAY
40 results
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ChIP-seq
in vitro differentiated cells
adipocyte
12
neural progenitor cell
7
hepatocyte
5
pancreatic endoderm
5
Hepatic endoderm
2
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