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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
Hi-C
4
ATAC-seq
2
pCHi-C
Assay category
10
3D chromatin structure
4
DNA accessibility
Date released
45
February, 2023
40
May, 2021
24
August, 2017
21
May, 2022
20
August, 2021
19
July, 2019
16
March, 2020
10
October, 2019
5
February, 2021
3
January, 2018
3
March, 2019
3
October, 2022
2
November, 2019
1
April, 2019
1
May, 2023
1
November, 2017
1
October, 2017
Available data
20
bigWig
bam
15
tsv
12
bedpe bed3+
10
hic
3
bed narrowPeak
2
ibed
Organism
16
Homo sapiens
Biosample type
9
tissue
4
in vitro differentiated cells
2
cell line
1
primary cell
Organ
5
pancreas
3
epithelium
2
blood vessel
2
heart
2
musculature of body
2
vasculature
1
liver
1
vein
Project
16
AMP
Genome assembly (visualization)
16
hg19
Lab
16
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
files.file_type!
bam
BIOSAMPLE
ASSAY
16 results
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Clear Filters
Hi-C
ATAC-seq
pCHi-C
tissue
islet of Langerhans
2
psoas muscle
2
aorta
1
heart left ventricle
1
heart right ventricle
1
+ See 2 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
1
lymphocyte of B lineage (iPSC)
1
1
cell line
EndoC_BH1
2
primary cell
endothelial cell of umbilical vein
1
See all biosamples
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