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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
ChIP-seq
Assay category
84
DNA binding
Target of assay
50
histone
50
histone modification
34
transcription factor
27
narrow histone mark
23
broad histone mark
6
chromatin remodeller
3
RNA binding protein
Date released
39
August, 2017
32
September, 2018
10
November, 2017
2
November, 2018
1
October, 2017
Available data
86
bam
86
bigWig
86
fastq
48
bed narrowPeak
15
bigBed narrowPeak
14
bed bed3+
3
tagAlign
bed broadPeak
Organism
84
Homo sapiens
Biosample type
44
primary cell
23
tissue
12
cell line
5
in vitro differentiated cells
Organ
54
pancreas
21
epithelium
17
connective tissue
12
adipose tissue
12
liver
1
brain
Project
84
AMP
Genome assembly (visualization)
84
hg19
77
GRCh38
Lab
84
AMP-T2D consortium
Audit category:
84
missing controlled_by
Audit category:
6
inconsistent control run_type
5
inconsistent control read length
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
84 results
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Clear Filters
ChIP-seq
primary cell
pancreatic endocrine cell
23
pancreatic ductal cell
13
pancreatic acinar cell
8
tissue
white adipose tissue
12
islet of Langerhans
10
brain
1
cell line
HepG2
12
in vitro differentiated cells
adipocyte
5
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