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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
280
ChIP-seq
Assay category
280
DNA binding
Target of assay
238
transcription factor
65
recombinant protein
34
RNA binding protein
23
histone
23
histone modification
16
control
15
chromatin remodeller
13
narrow histone mark
10
broad histone mark
2
other context
2
other post-translational modification
Date released
569
February, 2021
280
November, 2017
276
May, 2021
260
May, 2020
252
August, 2017
207
October, 2019
187
June, 2019
164
July, 2018
97
May, 2019
77
December, 2017
72
July, 2019
72
September, 2018
71
November, 2018
64
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
40
August, 2021
31
February, 2018
30
December, 2018
26
January, 2019
18
May, 2022
16
March, 2020
12
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
Available data
281
bigWig
280
bam
275
fastq
259
bed narrowPeak
258
bigBed narrowPeak
70
bed broadPeak
64
bigBed broadPeak
18
tagAlign
3
tar
Organism
280
Homo sapiens
Biosample type
266
cell line
9
primary cell
5
tissue
Organ
266
liver
14
brain
6
epithelium
6
vasculature
3
blood vessel
Project
280
AMP
Genome assembly (visualization)
280
GRCh38
280
hg19
Lab
280
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
280 results
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Clear Filters
ChIP-seq
cell line
HepG2
266
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
tissue
middle frontal area 46
2
caudate nucleus
1
cingulate gyrus
1
substantia nigra
1
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