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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
RRBS
3
Hi-C
Assay category
19
DNA methylation
3
3D chromatin structure
Date released
15
July, 2019
4
August, 2017
3
October, 2022
Available data
3016
bigWig
2998
bam
1598
bed narrowPeak
1402
tsv
1008
fastq
963
bigBed narrowPeak
298
bed broadPeak
262
bigBed broadPeak
250
bed bed3+
238
tagAlign
22
hic
21
bedpe bed3+
19
bed bedMethyl
19
bigBed bedMethyl
12
bed bed3
7
bed bedgraph
5
hdf5
4
tar
4
txt
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
Organism
22
Homo sapiens
Biosample type
13
primary cell
9
tissue
Organ
9
epithelium
5
pancreas
4
kidney
3
musculature of body
2
brain
2
heart
2
liver
1
connective tissue
1
eye
1
pericardium
1
vasculature
Project
19
AMP
3
HPAP
Genome assembly (visualization)
22
hg19
17
GRCh38
Lab
19
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
3
audit script error
2
inconsistent ontology term
BIOSAMPLE
ASSAY
22 results
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RRBS
Hi-C
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 8 more…
tissue
skeletal muscle tissue
2
brain
1
heart left ventricle
1
islet of Langerhans
1
kidney
1
+ See 3 more…
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