Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
Hi-C
19
RRBS
2
pCHi-C
Assay category
19
3D chromatin structure
19
DNA methylation
Date released
15
July, 2019
12
March, 2020
4
August, 2017
3
October, 2019
3
October, 2022
2
November, 2019
1
August, 2021
Available data
3016
bigWig
2998
bam
1598
bed narrowPeak
1402
tsv
1008
fastq
963
bigBed narrowPeak
298
bed broadPeak
262
bigBed broadPeak
250
bed bed3+
238
tagAlign
22
hic
21
bedpe bed3+
19
bed bedMethyl
19
bigBed bedMethyl
12
bed bed3
7
bed bedgraph
5
hdf5
4
tar
4
txt
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
Organism
40
Homo sapiens
Biosample type
18
tissue
14
primary cell
6
in vitro differentiated cells
2
cell line
Organ
11
epithelium
8
pancreas
5
heart
5
musculature of body
4
kidney
4
liver
3
vasculature
2
blood vessel
2
brain
1
connective tissue
1
eye
1
pericardium
1
vein
Project
37
AMP
3
HPAP
Genome assembly (visualization)
40
hg19
17
GRCh38
Lab
36
AMP-T2D consortium
3
Klaus Kaestner, Upenn
1
Bing Ren, UCSD
Audit category:
9
inconsistent ontology term
3
audit script error
BIOSAMPLE
ASSAY
40 results
search-icon
table-tab-icon
Clear Filters
Hi-C
RRBS
pCHi-C
tissue
heart left ventricle
1
1
islet of Langerhans
1
1
liver
1
1
pancreas
1
1
psoas muscle
2
+ See 7 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
endothelial cell of umbilical vein
1
epithelial cell of proximal tubule
1
+ See 9 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
1
lymphocyte of B lineage (iPSC)
1
1
cardiac precursors (cardiac muscle cell)
1
cell line
EndoC_BH1
1
HepG2
1
See all biosamples
Download