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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ATAC-seq
9
ChIP-seq
4
RRBS
Assay category
22
DNA accessibility
9
DNA binding
4
DNA methylation
Target of assay
9
control
Date released
18
May, 2022
6
August, 2017
5
December, 2017
4
February, 2021
2
September, 2017
Available data
bigWig
2998
bam
1598
bed narrowPeak
1402
tsv
1008
fastq
963
bigBed narrowPeak
298
bed broadPeak
262
bigBed broadPeak
250
bed bed3+
238
tagAlign
22
hic
21
bedpe bed3+
19
bed bedMethyl
19
bigBed bedMethyl
12
bed bed3
7
bed bedgraph
5
hdf5
4
tar
4
txt
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
Organism
35
Homo sapiens
Biosample type
24
tissue
9
in vitro differentiated cells
1
primary cell
1
stem cell
Organ
20
pancreas
5
connective tissue
2
liver
2
musculature of body
1
embryo
Project
35
AMP
Genome assembly (visualization)
35
hg19
9
GRCh38
Lab
18
Kyle Gaulton, UCSD
17
AMP-T2D consortium
files.file_type!
bigWig
BIOSAMPLE
ASSAY
35 results
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Clear Filters
ATAC-seq
ChIP-seq
RRBS
tissue
islet of Langerhans
18
2
liver
1
1
skeletal muscle tissue
2
in vitro differentiated cells
adipocyte
4
1
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
primary cell
skeletal muscle myoblast
1
stem cell
hESC
1
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