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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ChIP-seq
22
DNase-seq
1
FAIRE-seq
Assay category
45
DNA binding
23
DNA accessibility
Target of assay
39
histone
39
histone modification
22
broad histone mark
17
narrow histone mark
3
RNA binding protein
3
control
3
transcription factor
Date released
25
May, 2019
20
June, 2019
14
November, 2017
6
October, 2017
2
November, 2018
1
July, 2019
Available data
159
bigWig
155
bam
141
bed narrowPeak
65
bigBed narrowPeak
43
tagAlign
37
bed broadPeak
28
bigBed broadPeak
25
bed bed3+
17
fastq
12
tsv
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
tagAlign bed3+
Organism
68
Homo sapiens
Biosample type
54
tissue
14
primary cell
Organ
392
liver
387
pancreas
203
epithelium
97
kidney
91
connective tissue
91
heart
84
limb
84
vasculature
79
blood vessel
68
brain
54
blood
54
bodily fluid
49
musculature of body
26
nerve
25
artery
23
adipose tissue
19
embryo
18
ureter
14
spleen
13
vein
6
eye
Project
68
AMP
Genome assembly (visualization)
127
GRCh38
68
hg19
Lab
68
AMP-T2D consortium
Audit category:
3
missing controlled_by
BIOSAMPLE
ASSAY
68 results
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ChIP-seq
DNase-seq
FAIRE-seq
tissue
brain
6
14
temporal lobe
13
angular gyrus
12
frontal cortex
2
1
middle frontal area 46
2
+ See 4 more…
primary cell
astrocyte of the cerebellum
3
1
brain microvascular endothelial cell
3
1
choroid plexus epithelial cell
3
1
astrocyte of the hippocampus
1
brain pericyte
1
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