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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ChIP-seq
3
single cell RNA-seq
Assay category
26
DNA binding
3
Transcription
Target of assay
652
histone modification
651
histone
476
transcription factor
350
narrow histone mark
300
broad histone mark
99
RNA binding protein
85
recombinant protein
36
chromatin remodeller
29
control
5
other context
5
other post-translational modification
Date released
16
November, 2017
5
December, 2017
3
August, 2017
3
July, 2019
2
September, 2017
Available data
29
bam
26
fastq
20
bigWig
9
bed bed3+
3
tsv
2
tagAlign
Organism
29
Homo sapiens
Biosample type
13
cell line
7
primary cell
5
in vitro differentiated cells
3
tissue
1
stem cell
Organ
14
liver
6
brain
2
epithelium
2
pancreas
2
vasculature
1
blood vessel
1
connective tissue
1
embryo
Project
29
AMP
Genome assembly (visualization)
29
hg19
12
GRCh38
Lab
29
AMP-T2D consortium
3
Kyle Gaulton, UCSD
month_released!
August, 2021
BIOSAMPLE
ASSAY
29 results
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ChIP-seq
single cell RNA-seq
cell line
HepG2
13
primary cell
cerebellar granule cell
2
Purkinje cell
1
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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in vitro differentiated cells
Posterior foregut
1
adipocyte
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
tissue
islet of Langerhans
2
liver
1
stem cell
hESC
1
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