Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
183
DNase-seq
15
ChIP-seq
Assay category
183
DNA accessibility
15
DNA binding
Target of assay
13
histone
13
histone modification
8
broad histone mark
5
narrow histone mark
2
RNA binding protein
2
transcription factor
1
chromatin remodeller
Date released
164
June, 2019
November, 2017
15
August, 2017
9
November, 2018
9
October, 2019
1
November, 2020
Available data
2686
bigWig
2669
bam
1353
tsv
1339
bed narrowPeak
705
bigBed narrowPeak
689
fastq
250
bed bed3+
228
bed broadPeak
220
tagAlign
198
bigBed broadPeak
22
hic
21
bedpe bed3+
19
bed bedMethyl
19
bigBed bedMethyl
12
bed bed3
7
bed bedgraph
5
hdf5
4
txt
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
tar
Organism
198
Homo sapiens
Biosample type
160
tissue
36
primary cell
1
cell line
1
in vitro differentiated cells
Organ
71
kidney
36
limb
33
musculature of body
27
heart
22
brain
18
ureter
12
epithelium
12
vasculature
10
blood vessel
8
connective tissue
5
liver
5
pancreas
4
artery
4
eye
4
vein
2
adipose tissue
2
nerve
1
spleen
Project
198
AMP
Genome assembly (visualization)
217
GRCh38
198
hg19
Lab
198
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
1
inconsistent assembly
month_released!
November, 2017
April, 2018
BIOSAMPLE
ASSAY
198 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
ChIP-seq
tissue
muscle of arm
17
heart
16
brain
14
kidney
13
muscle of leg
13
+ See 28 more…
primary cell
skeletal muscle myoblast
1
13
endothelial cell of umbilical vein
2
2
cardiac fibroblast
2
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
+ See 14 more…
cell line
Panc1
1
in vitro differentiated cells
adipocyte
1
See all biosamples
Download