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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
total RNA-seq
15
small RNA-seq
14
RRBS
5
ATAC-seq
3
Hi-C
3
single cell RNA-seq
2
FAIRE-seq
Assay category
49
Transcription
14
DNA methylation
7
DNA accessibility
3
3D chromatin structure
Target of assay
3
control
Date released
315
May, 2021
281
November, 2017
260
May, 2020
214
October, 2019
212
August, 2017
173
June, 2019
162
July, 2018
119
February, 2021
97
May, 2019
77
December, 2017
73
July, 2019
September, 2018
70
November, 2018
65
April, 2019
58
November, 2019
56
August, 2021
47
April, 2018
42
October, 2018
39
May, 2022
35
February, 2023
32
March, 2020
31
February, 2018
30
December, 2018
26
January, 2019
12
October, 2017
7
September, 2017
5
December, 2019
3
August, 2018
3
June, 2018
3
March, 2019
3
October, 2022
2
January, 2018
Available data
59
bigWig
56
bam
49
tsv
14
bed bedMethyl
14
bigBed bedMethyl
7
bed narrowPeak
3
bed bed3+
3
hdf5
2
bigBed narrowPeak
Organism
73
Homo sapiens
Biosample type
50
tissue
23
primary cell
Organ
connective tissue
17
brain
17
heart
13
epithelium
12
adipose tissue
11
kidney
10
vasculature
9
blood vessel
9
liver
6
pancreas
5
musculature of body
3
artery
2
pericardium
1
eye
Project
73
AMP
Genome assembly (visualization)
73
hg19
63
GRCh38
Lab
73
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
September, 2018
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
73 results
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total RNA-seq
small RNA-seq
RRBS
ATAC-seq
Hi-C
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle
2
1
2
body of pancreas
2
2
right lobe of liver
2
2
frontal cortex
1
1
1
heart
2
1
+ See 18 more…
primary cell
cerebellar granule cell
2
epithelial cell of proximal tubule
1
1
kidney epithelial cell
1
1
renal cortical epithelial cell
1
1
skeletal muscle satellite cell
1
1
+ See 13 more…
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