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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
77
ChIP-seq
3
single cell RNA-seq
Assay category
77
DNA binding
3
Transcription
Target of assay
42
transcription factor
30
histone
30
histone modification
15
broad histone mark
15
narrow histone mark
5
control
4
RNA binding protein
3
chromatin remodeller
Date released
574
February, 2021
316
May, 2021
281
November, 2017
276
August, 2017
260
May, 2020
217
October, 2019
187
June, 2019
164
July, 2018
97
May, 2019
91
July, 2019
77
December, 2017
72
September, 2018
71
November, 2018
65
April, 2019
60
August, 2021
59
November, 2019
49
April, 2018
47
October, 2018
45
February, 2023
39
May, 2022
32
March, 2020
31
February, 2018
30
December, 2018
26
January, 2019
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
80
bam
80
fastq
75
bigWig
72
bed narrowPeak
50
bigBed narrowPeak
15
bed bed3+
3
tsv
Organism
80
Homo sapiens
Biosample type
38
in vitro differentiated cells
36
tissue
3
primary cell
3
stem cell
Organ
50
liver
17
epithelium
9
embryo
1
pancreas
Project
80
AMP
Genome assembly (visualization)
80
GRCh38
80
hg19
Lab
80
AMP-T2D consortium
Audit category:
27
inconsistent control
3
inconsistent ontology term
Audit category:
11
inconsistent control read length
BIOSAMPLE
ASSAY
80 results
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Clear Filters
ChIP-seq
single cell RNA-seq
in vitro differentiated cells
hepatocyte
14
pancreatic endoderm
7
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
+ See 1 more…
tissue
liver
29
right lobe of liver
7
primary cell
pancreatic cell
1
pancreatic ductal cell
1
unclassified exocrine cell
1
stem cell
hESC
3
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