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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ChIP-seq
2
single cell RNA-seq
Assay category
75
DNA binding
2
Transcription
Target of assay
42
transcription factor
28
histone
28
histone modification
15
broad histone mark
13
narrow histone mark
5
control
4
RNA binding protein
3
chromatin remodeller
Date released
530
February, 2021
281
November, 2017
276
August, 2017
252
May, 2020
243
May, 2021
197
October, 2019
165
June, 2019
158
July, 2018
95
May, 2019
89
July, 2019
75
December, 2017
72
September, 2018
71
November, 2018
65
April, 2019
60
August, 2021
49
April, 2018
47
October, 2018
42
February, 2023
39
May, 2022
39
November, 2019
31
February, 2018
30
December, 2018
26
January, 2019
21
March, 2020
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
March, 2019
3
October, 2022
2
June, 2018
1
May, 2023
Available data
77
bam
77
fastq
72
bigWig
70
bed narrowPeak
50
bigBed narrowPeak
15
bed bed3+
2
tsv
Organism
77
Homo sapiens
Biosample type
36
in vitro differentiated cells
36
tissue
3
stem cell
2
primary cell
Organ
50
liver
15
epithelium
7
embryo
1
pancreas
Project
77
AMP
Genome assembly (visualization)
77
GRCh38
77
hg19
Lab
77
AMP-T2D consortium
Audit category:
27
inconsistent control
inconsistent ontology term
Audit category:
10
inconsistent control read length
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
77 results
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Clear Filters
ChIP-seq
single cell RNA-seq
in vitro differentiated cells
hepatocyte
14
pancreatic endoderm
7
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
tissue
liver
29
right lobe of liver
7
stem cell
hESC
3
primary cell
pancreatic cell
1
pancreatic ductal cell
1
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