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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ChIP-seq
38
ATAC-seq
1
snATAC-seq
Assay category
47
DNA binding
39
DNA accessibility
Target of assay
42
transcription factor
histone
30
histone modification
15
broad histone mark
15
narrow histone mark
5
control
4
RNA binding protein
3
chromatin remodeller
Date released
574
February, 2021
257
November, 2017
233
May, 2020
200
May, 2021
168
June, 2019
164
July, 2018
154
August, 2017
91
July, 2019
71
November, 2018
49
April, 2018
49
November, 2019
47
December, 2017
46
October, 2019
45
February, 2023
42
August, 2021
40
September, 2018
39
May, 2022
30
December, 2018
29
March, 2020
19
January, 2019
17
October, 2018
15
February, 2018
7
October, 2017
7
September, 2017
6
November, 2020
5
April, 2019
5
December, 2019
5
May, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
80
bed narrowPeak
65
bam
65
fastq
62
bigWig
33
bigBed narrowPeak
6
bed bed3+
1
txt
Organism
86
Homo sapiens
Biosample type
70
tissue
15
in vitro differentiated cells
1
stem cell
Organ
53
liver
18
pancreas
4
embryo
2
epithelium
1
musculature of body
Project
86
AMP
Genome assembly (visualization)
86
hg19
47
GRCh38
Lab
48
AMP-T2D consortium
20
Karen Mohlke, UNC
18
Kyle Gaulton, UCSD
Audit category:
27
inconsistent control
1
audit script error
Audit category:
4
inconsistent control read length
target.investigated_as!
histone
BIOSAMPLE
ASSAY
86 results
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Clear Filters
ChIP-seq
ATAC-seq
snATAC-seq
tissue
liver
29
20
islet of Langerhans
18
right lobe of liver
2
skeletal muscle tissue
1
in vitro differentiated cells
pancreatic endoderm
4
Posterior foregut
3
definitive endodermal cell
3
primitive gut cell
3
hepatocyte
2
stem cell
hESC
1
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