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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ChIP-seq
3
single cell RNA-seq
Assay category
47
DNA binding
3
Transcription
Target of assay
42
transcription factor
30
histone
histone modification
15
broad histone mark
15
narrow histone mark
5
control
4
RNA binding protein
3
chromatin remodeller
Date released
574
February, 2021
257
November, 2017
233
May, 2020
200
May, 2021
168
June, 2019
164
July, 2018
153
August, 2017
91
July, 2019
71
November, 2018
49
April, 2018
49
November, 2019
47
December, 2017
46
October, 2019
45
February, 2023
42
August, 2021
40
September, 2018
39
May, 2022
30
December, 2018
29
March, 2020
19
January, 2019
17
October, 2018
15
February, 2018
7
October, 2017
7
September, 2017
6
November, 2020
5
April, 2019
5
December, 2019
5
May, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
50
bam
50
fastq
45
bigWig
42
bed narrowPeak
33
bigBed narrowPeak
5
bed bed3+
3
tsv
Organism
50
Homo sapiens
Biosample type
31
tissue
15
in vitro differentiated cells
3
primary cell
1
stem cell
Organ
33
liver
4
embryo
3
epithelium
1
pancreas
Project
50
AMP
Genome assembly (visualization)
50
GRCh38
50
hg19
Lab
50
AMP-T2D consortium
Audit category:
27
inconsistent control
1
inconsistent ontology term
Audit category:
4
inconsistent control read length
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
50 results
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Clear Filters
ChIP-seq
single cell RNA-seq
tissue
liver
29
right lobe of liver
2
in vitro differentiated cells
pancreatic endoderm
4
Posterior foregut
3
definitive endodermal cell
3
primitive gut cell
3
hepatocyte
2
primary cell
pancreatic cell
1
pancreatic ductal cell
1
unclassified exocrine cell
1
stem cell
hESC
1
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