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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
62
ChIP-seq
2
total RNA-seq
Assay category
62
DNA binding
2
Transcription
Target of assay
60
histone
histone modification
57
transcription factor
34
broad histone mark
26
narrow histone mark
15
RNA binding protein
5
control
3
chromatin remodeller
Date released
574
February, 2021
257
November, 2017
233
May, 2020
200
May, 2021
168
June, 2019
164
July, 2018
153
August, 2017
91
July, 2019
71
November, 2018
49
April, 2018
49
November, 2019
47
December, 2017
46
October, 2019
45
February, 2023
42
August, 2021
40
September, 2018
39
May, 2022
30
December, 2018
29
March, 2020
19
January, 2019
17
October, 2018
15
February, 2018
7
October, 2017
7
September, 2017
6
November, 2020
5
April, 2019
5
December, 2019
5
May, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
64
bam
64
fastq
59
bigWig
57
bed narrowPeak
48
bigBed narrowPeak
5
bed bed3+
2
tsv
Organism
64
Homo sapiens
Biosample type
46
tissue
15
in vitro differentiated cells
2
primary cell
1
stem cell
Organ
33
liver
12
pancreas
5
adipose tissue
5
connective tissue
4
embryo
4
epithelium
Project
64
AMP
Genome assembly (visualization)
64
GRCh38
64
hg19
Lab
64
AMP-T2D consortium
Audit category:
27
inconsistent control
Audit category:
4
inconsistent control read length
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
64 results
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Clear Filters
ChIP-seq
total RNA-seq
tissue
liver
29
body of pancreas
9
omental fat pad
3
right lobe of liver
2
subcutaneous adipose tissue
2
+ See 1 more…
in vitro differentiated cells
pancreatic endoderm
4
Posterior foregut
3
definitive endodermal cell
3
primitive gut cell
3
hepatocyte
2
primary cell
pancreatic acinar cell
2
stem cell
hESC
1
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