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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
total RNA-seq
8
Hi-C
2
ATAC-seq
2
ChIP-seq
Assay category
9
Transcription
8
3D chromatin structure
2
DNA accessibility
2
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
530
February, 2021
281
November, 2017
276
August, 2017
252
May, 2020
243
May, 2021
197
October, 2019
165
June, 2019
158
July, 2018
95
May, 2019
89
July, 2019
75
December, 2017
72
September, 2018
71
November, 2018
65
April, 2019
60
August, 2021
49
April, 2018
47
October, 2018
42
February, 2023
39
May, 2022
39
November, 2019
31
February, 2018
30
December, 2018
26
January, 2019
21
March, 2020
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
March, 2019
3
October, 2022
2
June, 2018
1
May, 2023
Available data
13
bigWig
11
bam
10
tsv
8
bedpe bed3+
8
hic
2
bed narrowPeak
Organism
21
Homo sapiens
Biosample type
18
tissue
2
cell line
1
primary cell
Organ
6
pancreas
4
heart
4
musculature of body
3
blood vessel
3
vasculature
2
liver
1
epithelium
1
vein
Project
19
AMP
2
T1D
Genome assembly (visualization)
21
hg19
11
GRCh38
Lab
21
AMP-T2D consortium
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
21 results
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Clear Filters
total RNA-seq
Hi-C
ATAC-seq
ChIP-seq
tissue
islet of Langerhans
2
2
psoas muscle
2
2
aorta
1
1
heart left ventricle
1
1
heart right ventricle
1
1
+ See 2 more…
cell line
early embryonic cell
2
primary cell
endothelial cell of umbilical vein
1
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