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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
total RNA-seq
8
Hi-C
4
ATAC-seq
3
ChIP-seq
2
pCHi-C
Assay category
11
Transcription
8
3D chromatin structure
4
DNA accessibility
3
DNA binding
Target of assay
3
histone
3
histone modification
3
narrow histone mark
Date released
510
February, 2021
313
May, 2021
281
November, 2017
276
August, 2017
260
May, 2020
209
October, 2019
164
July, 2018
157
June, 2019
82
May, 2019
77
December, 2017
74
July, 2019
72
September, 2018
71
November, 2018
60
August, 2021
59
November, 2019
49
April, 2018
47
October, 2018
45
February, 2023
39
May, 2022
31
February, 2018
30
December, 2018
28
March, 2020
26
January, 2019
18
April, 2019
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
18
bigWig
14
bam
13
tsv
10
bedpe bed3+
8
hic
3
bed narrowPeak
2
ibed
Organism
28
Homo sapiens
Biosample type
14
tissue
7
cell line
6
in vitro differentiated cells
1
primary cell
Organ
11
pancreas
6
epithelium
heart
4
musculature of body
3
blood vessel
3
vasculature
2
liver
1
vein
Project
23
AMP
5
T1D
Genome assembly (visualization)
28
hg19
14
GRCh38
Lab
28
AMP-T2D consortium
Audit category:
11
inconsistent ontology term
organ_slims!
heart
BIOSAMPLE
ASSAY
28 results
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Clear Filters
total RNA-seq
Hi-C
ATAC-seq
ChIP-seq
pCHi-C
tissue
islet of Langerhans
2
2
psoas muscle
2
2
aorta
1
1
liver
1
1
pancreas
1
1
cell line
EndoC_BH1
2
2
1
early embryonic cell
2
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
1
1
lymphocyte of B lineage (iPSC)
1
1
1
primary cell
endothelial cell of umbilical vein
1
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