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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
38
ChIP-seq
26
total RNA-seq
21
ATAC-seq
Assay category
38
DNA binding
26
Transcription
21
DNA accessibility
Target of assay
38
histone
38
histone modification
22
broad histone mark
16
narrow histone mark
Date released
574
February, 2021
316
May, 2021
281
November, 2017
276
August, 2017
260
May, 2020
217
October, 2019
187
June, 2019
164
July, 2018
97
May, 2019
91
July, 2019
77
December, 2017
72
September, 2018
71
November, 2018
65
April, 2019
60
August, 2021
59
November, 2019
49
April, 2018
47
October, 2018
45
February, 2023
39
May, 2022
32
March, 2020
31
February, 2018
30
December, 2018
26
January, 2019
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
85
bigWig
85
fastq
84
bam
58
bed narrowPeak
26
tsv
20
bigBed narrowPeak
6
tagAlign
4
bed broadPeak
Organism
85
Homo sapiens
Biosample type
72
primary cell
13
tissue
Organ
77
pancreas
61
epithelium
6
brain
1
adipose tissue
1
connective tissue
1
spleen
Project
85
AMP
Genome assembly (visualization)
86
GRCh38
85
hg19
Lab
84
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
35
missing controlled_by
BIOSAMPLE
ASSAY
85 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
tissue
brain
6
body of pancreas
4
islet of Langerhans
1
omental fat pad
1
spleen
1
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