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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
395
total RNA-seq
31
ChIP-seq
5
ATAC-seq
3
DNase-seq
3
small RNA-seq
Assay category
398
Transcription
31
DNA binding
8
DNA accessibility
Target of assay
23
transcription factor
8
histone
8
histone modification
5
RNA binding protein
4
broad histone mark
4
narrow histone mark
3
other context
3
other post-translational modification
Date released
386
February, 2021
15
August, 2017
12
July, 2019
6
January, 2019
5
November, 2018
5
October, 2018
3
December, 2018
2
October, 2017
1
January, 2018
1
June, 2019
1
October, 2019
Available data
437
bigWig
435
bam
398
tsv
35
fastq
27
bed narrowPeak
23
bigBed narrowPeak
7
bed bed3+
4
bed broadPeak
3
bigBed broadPeak
1
tagAlign
Organism
437
Homo sapiens
Biosample type
435
tissue
2
primary cell
Organ
617
liver
607
pancreas
567
connective tissue
423
adipose tissue
285
epithelium
175
heart
159
brain
153
vasculature
148
blood vessel
124
kidney
90
limb
85
artery
67
musculature of body
58
bone element
55
blood
55
bodily fluid
31
nerve
28
embryo
18
ureter
15
vein
14
spleen
6
eye
1
pericardium
1
pituitary gland
Project
437
AMP
Genome assembly (visualization)
438
GRCh38
437
hg19
Lab
437
AMP-T2D consortium
Audit category:
12
missing controlled_by
BIOSAMPLE
ASSAY
437 results
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total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
small RNA-seq
tissue
adipose tissue
381
1
2
spleen
12
1
1
white adipose tissue
12
omental fat pad
4
3
1
2
1
subcutaneous adipose tissue
6
2
1
1
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primary cell
mesenchymal stem cell of adipose
1
1
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