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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
2
ATAC-seq
1
RRBS
Assay category
32
DNA binding
2
DNA accessibility
1
DNA methylation
Target of assay
16
transcription factor
15
histone modification
14
histone
7
broad histone mark
7
narrow histone mark
1
control
Date released
388
February, 2021
266
November, 2017
170
May, 2020
50
December, 2017
50
November, 2018
35
August, 2017
21
July, 2019
20
May, 2022
18
August, 2021
8
October, 2019
5
December, 2019
5
January, 2019
5
October, 2018
3
June, 2019
2
March, 2020
1
February, 2023
1
January, 2018
1
May, 2023
1
November, 2019
1
October, 2017
Available data
34
fastq
33
bam
33
bigWig
21
bed narrowPeak
8
bigBed narrowPeak
7
bed bed3+
1
bed bedMethyl
1
bed broadPeak
1
bigBed bedMethyl
1
tagAlign
Organism
35
Homo sapiens
Biosample type
35
tissue
Organ
159
pancreas
64
connective tissue
20
liver
17
epithelium
15
adipose tissue
15
musculature of body
Project
35
AMP
Genome assembly (visualization)
35
GRCh38
35
hg19
Lab
35
AMP-T2D consortium
Audit category:
12
missing controlled_by
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
35 results
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ChIP-seq
ATAC-seq
RRBS
tissue
liver
18
1
white adipose tissue
12
adipose tissue
1
right lobe of liver
1
subcutaneous abdominal adipose tissue
1
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