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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
25
ChIP-seq
10
ATAC-seq
Assay category
54
Transcription
25
DNA binding
10
DNA accessibility
Target of assay
20
histone
20
histone modification
14
broad histone mark
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
64
February, 2021
19
October, 2019
3
July, 2019
3
May, 2019
Available data
93
bam
85
bigWig
54
tsv
39
bed narrowPeak
25
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
bigBed broadPeak
4
tagAlign
Organism
89
Homo sapiens
Biosample type
64
cell line
23
tissue
2
primary cell
Organ
653
pancreas
581
connective tissue
562
liver
424
adipose tissue
295
epithelium
161
heart
149
vasculature
147
blood vessel
136
brain
89
artery
70
bone element
60
limb
58
kidney
55
blood
55
bodily fluid
40
musculature of body
30
eye
29
embryo
29
nerve
13
spleen
13
vein
12
skeleton
2
pericardium
1
pituitary gland
Project
89
AMP
Genome assembly (visualization)
124
GRCh38
89
hg19
Lab
89
AMP-T2D consortium
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
89 results
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total RNA-seq
ChIP-seq
ATAC-seq
cell line
smooth muscle cell of the coronary artery
52
4
8
tissue
tibial artery
18
1
coronary artery
3
1
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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