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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
2
DNase-seq
Assay category
15
DNA binding
2
DNA accessibility
Target of assay
9
histone
9
histone modification
5
broad histone mark
4
narrow histone mark
3
RNA binding protein
3
control
3
transcription factor
Date released
9
November, 2017
6
October, 2017
2
November, 2018
Available data
159
bigWig
155
bam
141
bed narrowPeak
65
bigBed narrowPeak
43
tagAlign
37
bed broadPeak
28
bigBed broadPeak
25
bed bed3+
17
fastq
12
tsv
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
tagAlign bed3+
Organism
17
Homo sapiens
Biosample type
9
primary cell
8
tissue
Organ
390
liver
363
pancreas
173
epithelium
73
connective tissue
54
blood
54
bodily fluid
21
adipose tissue
19
embryo
17
brain
14
spleen
6
vasculature
3
blood vessel
2
musculature of body
Project
17
AMP
Genome assembly (visualization)
17
hg19
15
GRCh38
Lab
17
AMP-T2D consortium
Audit category:
3
missing controlled_by
BIOSAMPLE
ASSAY
17 results
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ChIP-seq
DNase-seq
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
tissue
brain
6
2
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