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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
total RNA-seq
13
ChIP-seq
3
ATAC-seq
1
DNase-seq
1
Hi-C
Assay category
34
Transcription
13
DNA binding
4
DNA accessibility
1
3D chromatin structure
Target of assay
12
histone
12
histone modification
6
broad histone mark
6
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
26
February, 2021
14
November, 2019
5
March, 2020
5
May, 2021
2
October, 2019
Available data
50
bigWig
49
bam
35
tsv
15
bed narrowPeak
1
bedpe bed3+
1
bigBed narrowPeak
1
hic
Organism
52
Homo sapiens
Biosample type
227
primary cell
52
cell line
20
in vitro differentiated cells
12
tissue
Organ
330
liver
64
artery
64
blood vessel
64
heart
64
vasculature
58
pancreas
55
blood
55
bodily fluid
52
epithelium
12
kidney
8
embryo
Project
48
AMP
4
T1D
Genome assembly (visualization)
52
hg19
49
GRCh38
Lab
52
AMP-T2D consortium
Audit category:
50
inconsistent ontology term
BIOSAMPLE
ASSAY
52 results
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total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
Hi-C
cell line
EndoC_BH1
33
13
3
1
glomerular visceral epithelial cell
1
1
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