Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
50
ChIP-seq
40
DNase-seq
35
ATAC-seq
4
total RNA-seq
1
RRBS
Assay category
75
DNA accessibility
50
DNA binding
4
Transcription
1
DNA methylation
Target of assay
49
histone
49
histone modification
34
broad histone mark
15
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
52
October, 2019
38
June, 2019
27
February, 2023
6
February, 2021
6
May, 2019
1
July, 2019
Available data
125
bed narrowPeak
102
bam
96
bigWig
90
bigBed narrowPeak
40
bed bed3+
40
bed broadPeak
40
bigBed broadPeak
4
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
130
Homo sapiens
Biosample type
126
tissue
4
primary cell
Organ
658
pancreas
625
liver
589
connective tissue
426
adipose tissue
311
epithelium
188
heart
165
vasculature
164
brain
159
blood vessel
129
kidney
96
limb
93
artery
73
musculature of body
70
bone element
55
blood
55
bodily fluid
34
eye
31
nerve
29
embryo
18
ureter
17
vein
14
spleen
12
skeleton
2
pericardium
1
pituitary gland
Project
130
AMP
Genome assembly (visualization)
130
hg19
102
GRCh38
Lab
130
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
130 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
total RNA-seq
RRBS
tissue
tibial nerve
24
2
1
4
tibial artery
18
2
1
muscle of leg
6
13
retina
3
15
muscle of arm
17
+ See 9 more…
primary cell
retinal pigment epithelial cell
2
1
1
See all biosamples
Download