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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
2
DNase-seq
2
Hi-C
1
FAIRE-seq
Assay category
13
DNA binding
3
DNA accessibility
2
3D chromatin structure
Target of assay
13
histone
13
histone modification
7
broad histone mark
6
narrow histone mark
Date released
17
October, 2019
1
March, 2020
Available data
16
bam
16
bigWig
14
bed narrowPeak
13
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
2
hic
1
bedpe bed3+
1
tagAlign
1
tar
Organism
18
Homo sapiens
Biosample type
17
primary cell
1
tissue
Organ
658
pancreas
625
liver
589
connective tissue
426
adipose tissue
311
epithelium
188
heart
165
vasculature
164
brain
159
blood vessel
129
kidney
96
limb
93
artery
73
musculature of body
70
bone element
55
blood
55
bodily fluid
34
eye
31
nerve
29
embryo
18
ureter
17
vein
14
spleen
12
skeleton
2
pericardium
1
pituitary gland
Project
18
AMP
Genome assembly (visualization)
18
hg19
13
GRCh38
Lab
18
AMP-T2D consortium
Audit category:
1
audit script error
BIOSAMPLE
ASSAY
18 results
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ChIP-seq
DNase-seq
Hi-C
FAIRE-seq
primary cell
endothelial cell of umbilical vein
12
2
2
1
tissue
pituitary gland
1
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