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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
11
ChIP-seq
10
ATAC-seq
4
DNase-seq
Assay category
54
Transcription
14
DNA accessibility
11
DNA binding
Target of assay
20
histone
20
histone modification
broad histone mark
6
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
64
February, 2021
7
October, 2019
3
July, 2019
3
May, 2019
2
June, 2019
Available data
79
bam
71
bigWig
54
tsv
25
bed narrowPeak
11
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
tagAlign
Organism
79
Homo sapiens
Biosample type
64
cell line
13
tissue
2
primary cell
Organ
595
liver
585
pancreas
573
connective tissue
426
adipose tissue
269
epithelium
151
heart
139
brain
122
vasculature
116
blood vessel
114
kidney
79
artery
70
bone element
62
limb
57
musculature of body
55
blood
55
bodily fluid
34
eye
25
embryo
18
ureter
15
nerve
12
skeleton
10
spleen
10
vein
2
pericardium
1
pituitary gland
Project
79
AMP
Genome assembly (visualization)
114
GRCh38
79
hg19
Lab
79
AMP-T2D consortium
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
79 results
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total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
cell line
smooth muscle cell of the coronary artery
52
4
8
tissue
tibial artery
4
1
2
coronary artery
3
1
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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