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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
total RNA-seq
4
ChIP-seq
Assay category
14
Transcription
4
DNA binding
Target of assay
histone
11
histone modification
7
narrow histone mark
4
broad histone mark
3
transcription factor
1
control
Date released
8
August, 2021
4
December, 2017
4
February, 2018
2
May, 2021
Available data
18
bam
17
bigWig
14
tsv
8
fastq
3
bed narrowPeak
1
bed bed3+
Organism
18
Homo sapiens
Biosample type
10
in vitro differentiated cells
8
cell line
Organ
554
connective tissue
543
liver
516
pancreas
424
adipose tissue
221
epithelium
126
heart
99
kidney
97
vasculature
92
blood vessel
73
artery
70
bone element
54
blood
54
bodily fluid
48
limb
47
brain
46
musculature of body
33
eye
18
embryo
18
ureter
12
skeleton
8
spleen
7
nerve
5
vein
2
pericardium
Project
18
AMP
Genome assembly (visualization)
18
GRCh38
18
hg19
hg18
Lab
18
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
inconsistent control read length
target.investigated_as!
histone
assembly!
hg18
BIOSAMPLE
ASSAY
18 results
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total RNA-seq
ChIP-seq
in vitro differentiated cells
pancreatic endoderm
4
4
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
cell line
H1-hESC
8
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