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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
3
single cell RNA-seq
Assay category
15
DNA binding
3
Transcription
Target of assay
701
histone
701
histone modification
359
narrow histone mark
341
broad histone mark
158
transcription factor
45
RNA binding protein
18
control
13
chromatin remodeller
7
recombinant protein
3
other context
3
other post-translational modification
Date released
5
December, 2017
3
July, 2019
3
May, 2021
3
November, 2017
2
August, 2017
2
September, 2017
Available data
15
bam
12
fastq
10
bigWig
8
bed bed3+
3
tsv
1
tagAlign
Organism
18
Homo sapiens
Biosample type
10
primary cell
5
in vitro differentiated cells
2
tissue
1
stem cell
Organ
liver
6
brain
2
epithelium
2
pancreas
2
vasculature
1
blood vessel
1
connective tissue
1
embryo
Project
18
AMP
Genome assembly (visualization)
18
hg19
11
GRCh38
Lab
15
AMP-T2D consortium
3
Kyle Gaulton, UCSD
organ_slims!
liver
BIOSAMPLE
ASSAY
18 results
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ChIP-seq
single cell RNA-seq
primary cell
CD8-positive, alpha-beta T cell
3
cerebellar granule cell
2
Purkinje cell
1
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
+ See 2 more…
in vitro differentiated cells
Posterior foregut
1
adipocyte
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
tissue
islet of Langerhans
2
stem cell
hESC
1
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