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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ChIP-seq
3
single cell RNA-seq
Assay category
27
DNA binding
3
Transcription
Target of assay
642
histone modification
641
histone
468
transcription factor
342
narrow histone mark
298
broad histone mark
91
RNA binding protein
85
recombinant protein
36
chromatin remodeller
30
control
5
other context
5
other post-translational modification
Date released
16
November, 2017
5
December, 2017
3
August, 2017
3
July, 2019
3
May, 2021
Available data
27
bam
24
fastq
23
bigWig
7
bed bed3+
3
tsv
2
tagAlign
Organism
30
Homo sapiens
Biosample type
13
cell line
10
primary cell
5
in vitro differentiated cells
1
stem cell
1
tissue
Organ
14
liver
6
brain
2
epithelium
pancreas
2
vasculature
1
blood vessel
1
connective tissue
1
embryo
Project
30
AMP
Genome assembly (visualization)
30
hg19
10
GRCh38
Lab
27
AMP-T2D consortium
3
Kyle Gaulton, UCSD
organ_slims!
pancreas
BIOSAMPLE
ASSAY
30 results
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ChIP-seq
single cell RNA-seq
cell line
HepG2
13
primary cell
CD8-positive, alpha-beta T cell
3
cerebellar granule cell
2
Purkinje cell
1
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
+ See 2 more…
in vitro differentiated cells
Posterior foregut
1
adipocyte
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
stem cell
hESC
1
tissue
liver
1
See all biosamples
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