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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
123
ChIP-seq
Assay category
123
DNA binding
Target of assay
123
histone modification
122
histone
61
broad histone mark
60
narrow histone mark
47
transcription factor
8
RNA binding protein
3
chromatin remodeller
3
control
Date released
171
October, 2019
123
August, 2017
116
May, 2021
92
May, 2019
60
April, 2019
32
September, 2018
30
December, 2017
30
October, 2018
27
May, 2020
24
November, 2017
19
June, 2019
18
August, 2021
16
February, 2018
10
November, 2019
7
January, 2019
6
October, 2017
3
March, 2020
Available data
123
bigWig
108
bed narrowPeak
103
bam
103
fastq
37
bed broadPeak
37
tagAlign
30
bigBed narrowPeak
12
bed bed3+
11
bigBed broadPeak
Organism
117
Homo sapiens
Biosample type
60
tissue
38
primary cell
25
in vitro differentiated cells
Organ
58
pancreas
27
connective tissue
14
epithelium
13
liver
13
musculature of body
2
adipose tissue
Project
123
AMP
Genome assembly (visualization)
123
hg19
103
GRCh38
Lab
123
AMP-T2D consortium
Audit category:
16
missing controlled_by
Audit category:
10
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
BIOSAMPLE
ASSAY
123 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
20
liver
13
skeletal muscle tissue
13
pancreas
12
adipose tissue
1
+ See 1 more…
primary cell
pancreatic endocrine cell
12
skeletal muscle myoblast
12
pancreatic alpha cell
7
pancreatic beta cell
7
in vitro differentiated cells
adipocyte
25
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