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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
60
ChIP-seq
Assay category
60
DNA binding
Target of assay
123
histone modification
122
histone
61
broad histone mark
60
narrow histone mark
47
transcription factor
8
RNA binding protein
3
chromatin remodeller
3
control
Date released
119
October, 2019
60
August, 2017
52
May, 2021
34
May, 2019
27
May, 2020
23
April, 2019
15
December, 2017
15
September, 2018
14
November, 2017
11
August, 2021
11
June, 2019
11
October, 2018
8
February, 2018
4
November, 2019
3
January, 2019
3
March, 2020
1
October, 2017
Available data
60
bigWig
52
bam
52
fastq
50
bed narrowPeak
15
bed broadPeak
15
tagAlign
12
bigBed narrowPeak
6
bed bed3+
5
bigBed broadPeak
Organism
58
Homo sapiens
Biosample type
26
tissue
22
primary cell
12
in vitro differentiated cells
Organ
30
pancreas
14
connective tissue
8
epithelium
5
liver
5
musculature of body
2
adipose tissue
Project
60
AMP
Genome assembly (visualization)
60
hg19
52
GRCh38
Lab
60
AMP-T2D consortium
Audit category:
11
missing controlled_by
Audit category:
7
inconsistent control read length
1
inconsistent assembly
1
inconsistent control run_type
BIOSAMPLE
ASSAY
60 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
10
liver
5
skeletal muscle tissue
5
pancreas
4
adipose tissue
1
+ See 1 more…
primary cell
pancreatic endocrine cell
8
skeletal muscle myoblast
6
pancreatic alpha cell
4
pancreatic beta cell
4
in vitro differentiated cells
adipocyte
12
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