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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1030
total RNA-seq
905
ChIP-seq
259
ATAC-seq
180
single cell RNA-seq
177
DNase-seq
28
snATAC-seq
23
pCHi-C
16
Hi-C
16
small RNA-seq
4
FAIRE-seq
4
MeRIP-seq
3
RNA microarray
3
snDrop-seq
Date released
18
March, 2020
4
October, 2019
1
May, 2021
Available data
18
tsv
Organism
23
Homo sapiens
Biosample type
23
tissue
16
primary cell
4
cell line
3
stem cell
2
in vitro differentiated cells
Organ
4
eye
3
heart
2
brain
2
intestine
2
thymus
1
adipose tissue
1
adrenal gland
1
blood vessel
1
connective tissue
1
esophagus
1
gonad
1
large intestine
1
liver
1
lung
1
musculature of body
1
ovary
1
pancreas
1
small intestine
1
spleen
1
vasculature
Project
22
AMP
1
T1D
Lab
22
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
assay_slims!
DNA methylation
BIOSAMPLE
ASSAY
23 results
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pCHi-C
tissue
islet of Langerhans
4
thymus
2
Ammon's horn
1
adipose tissue
1
adrenal gland
1
aorta
1
dorsolateral prefrontal cortex
1
esophagus
1
heart left ventricle
1
heart right ventricle
1
liver
1
lung
1
ovary
1
pancreas
1
psoas muscle
1
right cardiac atrium
1
sigmoid colon
1
small intestine
1
spleen
1
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