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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ChIP-seq
3
pCHi-C
1
GRO-seq
Assay category
3
DNA binding
Transcription
Target of assay
2
histone
2
histone modification
1
broad histone mark
1
control
1
narrow histone mark
Date released
3
December, 2017
3
March, 2020
1
January, 2018
Available data
4
fastq
3
bam
3
bed bed3+
3
bigWig
3
tsv
2
bed narrowPeak
Organism
7
Homo sapiens
Biosample type
1420
tissue
609
primary cell
491
cell line
232
in vitro differentiated cells
7
stem cell
Project
7
AMP
Genome assembly (visualization)
3
GRCh38
3
hg19
1
hg18
Lab
7
AMP-T2D consortium
Audit category:
inconsistent ontology term
Audit category:
2
inconsistent control read length
audit.ERROR.category!
inconsistent ontology term
assay_slims!
Transcription
BIOSAMPLE
ASSAY
7 results
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ChIP-seq
pCHi-C
GRO-seq
stem cell
hESC
3
1
mesendoderm
1
neural progenitor cell (neural stem cell)
1
trophoblast
1
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