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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
89
ChIP-seq
Assay category
89
DNA binding
Target of assay
593
histone modification
592
histone
309
narrow histone mark
283
broad histone mark
187
control
89
transcription factor
23
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
31
December, 2017
23
August, 2017
15
October, 2018
7
November, 2018
6
April, 2019
4
May, 2019
3
December, 2018
Available data
89
bam
88
bigWig
79
fastq
70
bed narrowPeak
65
bigBed narrowPeak
13
bed bed3+
Organism
89
Homo sapiens
Biosample type
361
cell line
89
tissue
49
in vitro differentiated cells
10
primary cell
Organ
39
liver
17
adipose tissue
17
connective tissue
17
pancreas
7
heart
6
spleen
3
blood vessel
3
vasculature
1
artery
1
kidney
Project
89
AMP
Genome assembly (visualization)
88
GRCh38
88
hg19
Lab
89
AMP-T2D consortium
Audit category:
27
inconsistent control
Audit category:
18
missing controlled_by
audit.ERROR.category!
inconsistent replicate
BIOSAMPLE
ASSAY
89 results
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ChIP-seq
tissue
liver
37
white adipose tissue
12
body of pancreas
9
islet of Langerhans
7
spleen
6
heart left ventricle
5
omental fat pad
3
right lobe of liver
2
subcutaneous adipose tissue
2
ascending aorta
1
coronary artery
1
kidney
1
pancreas
1
right atrium auricular region
1
thoracic aorta
1
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