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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1737
ChIP-seq
1461
total RNA-seq
484
ATAC-seq
263
single cell RNA-seq
182
DNase-seq
85
RNA microarray
67
WGBS
55
snATAC-seq
54
pCHi-C
27
Hi-C
19
RRBS
17
small RNA-seq
10
MeRIP-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
17
Transcription
Date released
17
July, 2019
Available data
17
bam
17
bigWig
17
tsv
Organism
17
Homo sapiens
Biosample type
15
tissue
2
primary cell
Organ
4
brain
3
adipose tissue
3
connective tissue
3
liver
2
musculature of body
2
pancreas
heart
1
kidney
Project
17
AMP
Genome assembly (visualization)
17
GRCh38
17
hg19
Lab
17
AMP-T2D consortium
audit.ERROR.category!
audit script error
organ_slims!
heart
assay_title!
CRISPR genome editing followed by sgRNA sequencing
BIOSAMPLE
ASSAY
17 results
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small RNA-seq
tissue
body of pancreas
2
right lobe of liver
2
cerebellum (Hemisphere)
1
diencephalon
1
frontal cortex
1
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primary cell
mesenchymal stem cell of adipose
1
skeletal muscle satellite cell
1
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