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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
154
ChIP-seq
59
total RNA-seq
17
pCHi-C
5
ATAC-seq
Assay category
154
DNA binding
59
Transcription
5
DNA accessibility
Target of assay
134
histone
134
histone modification
74
broad histone mark
60
narrow histone mark
12
transcription factor
8
control
5
RNA binding protein
Date released
235
May, 2021
45
May, 2020
24
May, 2022
23
February, 2023
16
January, 2021
Available data
175
bigWig
135
bam
114
bed narrowPeak
84
tagAlign
51
tsv
2
bed bed3+
Organism
235
Homo sapiens
Biosample type
186
primary cell
47
in vitro differentiated cells
2
tissue
Organ
1
bone element
1
bone marrow
1
connective tissue
1
pancreas
1
thymus
Project
152
T1D
83
AMP
Genome assembly (visualization)
175
hg19
135
GRCh38
Lab
235
Kyle Gaulton, UCSD
164
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
audit.ERROR.category!
audit script error
BIOSAMPLE
ASSAY
235 results
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Clear Filters
ChIP-seq
total RNA-seq
pCHi-C
ATAC-seq
primary cell
monocyte
84
51
1
CD8-positive, alpha-beta T cell
33
2
1
CD4-positive, alpha-beta T cell
2
B cell
1
activated CD4-positive, alpha-beta T cell
1
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in vitro differentiated cells
embryonic stem cell
37
5
5
tissue
pancreas
1
thymus
1
See all biosamples
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