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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
RRBS
8
Hi-C
3
WGBS
1
single cell RNA-seq
Assay category
18
DNA methylation
8
3D chromatin structure
1
Transcription
Date released
270
August, 2021
205
February, 2023
175
May, 2022
129
August, 2017
122
May, 2021
111
February, 2021
63
October, 2019
59
September, 2020
58
May, 2020
48
March, 2020
47
September, 2023
40
May, 2024
26
July, 2019
25
February, 2020
19
April, 2020
16
January, 2021
15
May, 2023
14
November, 2017
10
November, 2020
8
January, 2018
8
October, 2017
7
August, 2020
5
March, 2023
4
July, 2018
4
March, 2019
2
November, 2019
1
April, 2019
1
August, 2018
1
December, 2018
1
December, 2019
1
November, 2018
1
October, 2022
1
September, 2018
Available data
157
bigWig
bam
91
tsv
73
fastq
53
bed narrowPeak
23
bed bedMethyl
23
bigBed bedMethyl
16
bigBed narrowPeak
4
bed bed3+
4
hdf5
1
csv
Organism
27
Homo sapiens
Biosample type
14
primary cell
13
tissue
Organ
8
epithelium
5
brain
5
musculature of body
4
heart
4
kidney
4
limb
3
liver
3
vasculature
2
blood vessel
2
connective tissue
2
pancreas
1
eye
1
pericardium
Project
27
AMP
Genome assembly (visualization)
19
hg19
Lab
27
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
audit.ERROR.category!
audit script error
files.file_type!
bam
BIOSAMPLE
ASSAY
27 results
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Clear Filters
RRBS
Hi-C
WGBS
single cell RNA-seq
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
cardiac fibroblast
1
cardiac muscle cell
1
+ See 9 more…
tissue
gastrocnemius medialis
4
heart left ventricle
1
2
brain
1
islet of Langerhans
1
kidney
1
+ See 3 more…
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