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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
174
ChIP-seq
8
DNase-seq
ATAC-seq
1
FAIRE-seq
Assay category
174
DNA binding
9
DNA accessibility
Target of assay
167
histone
167
histone modification
117
narrow histone mark
50
broad histone mark
7
recombinant protein
7
transcription factor
Date released
313
November, 2017
210
June, 2019
183
October, 2019
137
August, 2017
120
May, 2021
97
May, 2019
73
November, 2018
72
December, 2017
65
April, 2019
45
October, 2018
40
May, 2024
32
September, 2018
30
August, 2021
30
December, 2018
27
May, 2020
21
January, 2019
16
February, 2018
11
November, 2019
6
October, 2017
5
February, 2021
3
March, 2020
2
July, 2019
1
November, 2020
Available data
244
bam
202
bigWig
183
bed narrowPeak
67
bigBed narrowPeak
49
tagAlign
16
tsv
9
bed broadPeak
9
bigBed broadPeak
8
bed bed3+
3
bedpe bed3+
3
hic
1
hdf5
1
tagAlign bed3+
1
tar
Organism
183
Homo sapiens
Biosample type
149
tissue
19
primary cell
15
cell line
Organ
75
brain
46
limb
33
blood vessel
33
vasculature
26
nerve
20
artery
20
epithelium
16
kidney
13
vein
7
pancreas
5
heart
5
liver
1
pituitary gland
Project
183
AMP
Genome assembly (visualization)
183
hg19
182
GRCh38
Lab
183
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
audit.ERROR.category!
audit script error
assay_title!
ATAC-seq
BIOSAMPLE
ASSAY
183 results
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Clear Filters
ChIP-seq
DNase-seq
FAIRE-seq
tissue
tibial nerve
24
2
tibial artery
18
2
brain
5
heart
5
liver
5
+ See 74 more…
primary cell
endothelial cell of umbilical vein
10
2
1
epithelial cell of proximal tubule
6
cell line
Panc1
6
1
RCC 7860 HIF1a re-expression
3
RCC 7860 HIF2a over-expression
2
RCC 7860 vector
2
glomerular visceral epithelial cell
1
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