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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ChIP-seq
2
DNase-seq
1
FAIRE-seq
1
Hi-C
1
pCHi-C
Assay category
17
DNA binding
3
DNA accessibility
1
3D chromatin structure
Target of assay
15
histone
15
histone modification
9
broad histone mark
6
narrow histone mark
2
control
Date released
20
October, 2019
1
March, 2020
1
May, 2021
Available data
20
bam
15
bigWig
13
bed narrowPeak
13
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
1
bedpe bed3+
1
hic
1
tar
Organism
22
Homo sapiens
Biosample type
22
primary cell
Organ
942
pancreas
791
liver
684
connective tissue
519
epithelium
491
adipose tissue
393
heart
347
kidney
286
brain
235
vasculature
229
blood vessel
159
bone element
141
artery
122
limb
95
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
37
embryo
25
spleen
21
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
21
AMP
1
T1D
Genome assembly (visualization)
16
hg19
12
GRCh38
Lab
21
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
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audit script error
BIOSAMPLE
ASSAY
22 results
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ChIP-seq
DNase-seq
FAIRE-seq
Hi-C
pCHi-C
primary cell
endothelial cell of umbilical vein
17
2
1
1
megakaryocyte
1
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