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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
ChIP-seq
Assay category
DNA accessibility
39
DNA binding
Target of assay
30
histone
30
histone modification
15
broad histone mark
15
narrow histone mark
9
transcription factor
7
recombinant protein
2
RNA binding protein
Date released
18
April, 2019
15
October, 2019
4
May, 2019
2
June, 2019
Available data
64
bam
57
txt
51
bigWig
39
bed narrowPeak
24
bigBed narrowPeak
17
tsv
4
bed bedMethyl
4
bigBed bedMethyl
1
hic
Organism
39
Homo sapiens
Biosample type
20
tissue
12
primary cell
7
cell line
Organ
413
liver
170
brain
140
pancreas
114
heart
97
epithelium
75
vasculature
73
blood vessel
58
connective tissue
54
blood
54
bodily fluid
48
limb
39
kidney
27
musculature of body
25
artery
24
nerve
14
embryo
12
spleen
10
vein
7
adipose tissue
2
eye
1
pituitary gland
Project
39
AMP
Genome assembly (visualization)
39
GRCh38
39
hg19
Lab
39
AMP-T2D consortium
Audit category:
11
inconsistent ontology term
audit.ERROR.category!
audit script error
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
39 results
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ChIP-seq
tissue
kidney
20
primary cell
epithelial cell of proximal tubule
8
kidney epithelial cell
4
cell line
RCC 7860 HIF1a re-expression
3
RCC 7860 HIF2a over-expression
2
RCC 7860 vector
2
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