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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
113
ChIP-seq
Assay category
113
DNA binding
Target of assay
113
histone
113
histone modification
59
narrow histone mark
54
broad histone mark
39
control
17
transcription factor
9
RNA binding protein
7
recombinant protein
3
nucleotide modification
1
chromatin remodeller
Date released
23
October, 2019
21
September, 2018
18
April, 2019
14
August, 2017
14
December, 2017
10
November, 2019
3
August, 2021
3
May, 2019
2
June, 2019
2
May, 2021
2
November, 2017
1
March, 2020
Available data
113
bam
110
bigWig
108
bed narrowPeak
51
fastq
47
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
4
tagAlign
3
bed bed3+
Organism
113
Homo sapiens
Biosample type
66
primary cell
20
tissue
15
in vitro differentiated cells
12
cell line
Organ
187
brain
151
pancreas
103
liver
97
heart
93
epithelium
78
connective tissue
71
vasculature
70
blood vessel
49
limb
33
musculature of body
32
adipose tissue
30
kidney
24
nerve
20
artery
15
vein
12
embryo
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
111
AMP
2
T1D
Genome assembly (visualization)
110
hg19
108
GRCh38
Lab
113
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
Audit category:
21
missing controlled_by
Audit category:
5
inconsistent control read length
audit.ERROR.category!
audit script error
BIOSAMPLE
ASSAY
113 results
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Clear Filters
ChIP-seq
primary cell
endothelial cell of umbilical vein
15
pancreatic ductal cell
13
pancreatic acinar cell
8
epithelial cell of proximal tubule
7
pancreatic alpha cell
7
+ See 6 more…
tissue
kidney
20
in vitro differentiated cells
hepatocyte
12
Hepatic endoderm
2
pancreatic PP cell
1
cell line
EndoC_BH1
12
See all biosamples
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