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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
36
DNase-seq
8
ATAC-seq
1
WGBS
Assay category
66
DNA binding
44
DNA accessibility
3D chromatin structure
1
DNA methylation
Target of assay
49
histone
49
histone modification
34
broad histone mark
17
control
15
narrow histone mark
Date released
65
October, 2019
32
June, 2019
7
May, 2019
6
February, 2021
1
July, 2019
Available data
114
bam
92
bed narrowPeak
91
bigWig
84
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
111
Homo sapiens
Biosample type
111
tissue
Organ
613
liver
519
pancreas
360
epithelium
329
kidney
brain
222
heart
205
connective tissue
163
vasculature
157
blood vessel
111
limb
101
bone element
90
adipose tissue
83
artery
80
musculature of body
69
blood
69
bodily fluid
56
eye
38
nerve
24
spleen
23
embryo
20
vein
19
lung
18
ureter
16
skeleton
4
gonad
4
ovary
2
pituitary gland
1
bone marrow
1
lymph node
1
pericardium
1
skin of body
1
thymus
Project
111
AMP
Genome assembly (visualization)
92
GRCh38
92
hg19
Lab
111
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
audit.ERROR.category!
audit script error
assay_slims!
3D chromatin structure
organ_slims!
brain
files.file_type!
tsv
BIOSAMPLE
ASSAY
111 results
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ChIP-seq
DNase-seq
ATAC-seq
WGBS
tissue
tibial nerve
35
2
1
tibial artery
23
2
1
muscle of leg
7
13
1
muscle of arm
17
distal epiphysis of femur
1
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