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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
83
ChIP-seq
7
total RNA-seq
5
Hi-C
1
WGBS
Assay category
83
DNA binding
DNA accessibility
7
Transcription
5
3D chromatin structure
1
DNA methylation
Target of assay
64
histone
64
histone modification
43
broad histone mark
21
narrow histone mark
19
control
Date released
80
October, 2019
7
May, 2019
5
July, 2019
3
February, 2020
1
March, 2020
Available data
87
bam
65
bigWig
58
bed narrowPeak
58
bigBed narrowPeak
7
tsv
2
bed broadPeak
2
bigBed broadPeak
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
hic
Organism
96
Homo sapiens
Biosample type
78
tissue
18
primary cell
Organ
770
pancreas
762
liver
650
connective tissue
483
adipose tissue
396
epithelium
316
heart
249
brain
184
kidney
177
vasculature
173
blood vessel
147
bone element
92
artery
78
limb
61
musculature of body
60
blood
60
bodily fluid
40
nerve
37
embryo
29
eye
23
spleen
18
vein
10
lung
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
96
AMP
Genome assembly (visualization)
65
hg19
62
GRCh38
Lab
96
AMP-T2D consortium
Audit category:
audit script error
audit.ERROR.category!
audit script error
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
96 results
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ChIP-seq
total RNA-seq
Hi-C
WGBS
tissue
tibial nerve
35
5
tibial artery
23
1
muscle of leg
7
1
gastrocnemius medialis
1
4
islet of Langerhans
1
primary cell
endothelial cell of umbilical vein
17
1
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