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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
49
ATAC-seq
48
snATAC-seq
47
WGBS
Assay category
Transcription
97
DNA accessibility
47
DNA methylation
Date released
101
May, 2022
33
February, 2021
7
August, 2020
3
September, 2020
Available data
101
zippedFastqFolder
43
fastq
10
bigWig
6
tsv
3
bedpe bed3+
3
cool
hic
Organism
144
Homo sapiens
Biosample type
144
primary cell
Organ
96
epithelium
96
pancreas
Project
144
HPAP
Genome assembly (visualization)
10
GRCh38
Lab
2392
AMP-T2D consortium
228
Kyle Gaulton, UCSD
144
Klaus Kaestner, Upenn
81
Katalin Susztak, Upenn
40
Patrick T. Ellinor, Broad
26
Bing Ren, UCSD
20
Karen Mohlke, UNC
10
Rohit N. Kulkarni, M.D., Ph.D.
10
Xin Sun, UCSD
7
Struan F.A. Grant, CHOP
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
27
audit script error
audit.ERROR.category!
inconsistent control
assay_slims!
Transcription
files.file_type!
hic
BIOSAMPLE
ASSAY
144 results
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ATAC-seq
snATAC-seq
WGBS
primary cell
pancreatic alpha cell
29
31
Langerhans cell
48
pancreatic beta cell
16
16
pancreatic acinar cell
4
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