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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
ChIP-seq
10
snATAC-seq
9
single cell RNA-seq
1
Hi-C
Assay category
33
DNA binding
10
DNA accessibility
9
Transcription
1
3D chromatin structure
Target of assay
27
transcription factor
4
control
2
RNA binding protein
1
chromatin remodeller
Date released
712
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
67
December, 2017
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
34
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
34
fastq
33
bam
29
bed narrowPeak
29
bigBed narrowPeak
29
bigWig
Organism
52
Homo sapiens
Biosample type
27
cell line
26
tissue
Organ
26
blood
26
bodily fluid
19
lung
7
spleen
1
liver
Project
34
AMP
19
LungMap
Genome assembly (visualization)
29
GRCh38
29
hg19
Lab
34
AMP-T2D consortium
19
Xin Sun, UCSD
Audit category:
inconsistent control
audit.ERROR.category!
inconsistent control
assay_title!
snDrop-seq
BIOSAMPLE
ASSAY
53 results
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Clear Filters
ChIP-seq
snATAC-seq
single cell RNA-seq
Hi-C
cell line
GM12878
26
HepG2
1
tissue
lung
10
9
spleen
7
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