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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
195
total RNA-seq
141
single cell RNA-seq
86
ChIP-seq
76
snATAC-seq
60
ATAC-seq
47
WGBS
17
pCHi-C
4
Hi-C
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
Assay category
195
Transcription
Date released
81
February, 2023
51
May, 2021
45
May, 2020
16
September, 2020
2
March, 2020
Available data
96
bam
96
bigWig
96
tsv
92
fastq
Organism
195
Homo sapiens
Biosample type
188
primary cell
7
tissue
cell line
Organ
60
pancreas
53
epithelium
Project
AMP
103
T1D
92
HPAP
Genome assembly (visualization)
96
GRCh38
96
hg19
Lab
101
Kyle Gaulton, UCSD
92
Klaus Kaestner, Upenn
2
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
audit.ERROR.category!
inconsistent control
award.project!
AMP
biosample_type!
cell line
BIOSAMPLE
ASSAY
195 results
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total RNA-seq
primary cell
monocyte
53
pancreatic alpha cell
42
exocrine cell
39
pancreatic beta cell
11
B cell
2
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tissue
islet of Langerhans
7
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