Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
5
DNase-seq
3
Hi-C
1
RRBS
Assay category
9
DNA binding
5
DNA accessibility
3
3D chromatin structure
Transcription
1
DNA methylation
Target of assay
3
RNA binding protein
3
control
3
histone
3
histone modification
3
narrow histone mark
3
transcription factor
Date released
9
November, 2017
5
June, 2019
4
July, 2019
Available data
17
bigWig
14
bam
11
bed broadPeak
11
bed narrowPeak
11
bigBed broadPeak
11
bigBed narrowPeak
9
fastq
8
bed bed3+
3
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
Organism
18
Homo sapiens
Biosample type
244
tissue
18
primary cell
Organ
243
epithelium
191
pancreas
35
vasculature
30
kidney
29
blood vessel
24
connective tissue
22
vein
18
brain
12
musculature of body
9
heart
9
liver
8
blood
8
bodily fluid
5
eye
1
bone element
1
bone marrow
Project
18
AMP
Genome assembly (visualization)
18
hg19
11
GRCh38
Lab
18
AMP-T2D consortium
audit.ERROR.category!
inconsistent control
assay_slims!
Transcription
BIOSAMPLE
ASSAY
18 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
Hi-C
RRBS
primary cell
astrocyte of the cerebellum
3
1
1
brain microvascular endothelial cell
3
1
1
choroid plexus epithelial cell
3
1
1
brain pericyte
1
1
astrocyte of the hippocampus
1
Download