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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
6
single cell RNA-seq
1
pCHi-C
Assay category
62
Transcription
Date released
52
February, 2021
6
August, 2021
July, 2019
3
February, 2020
2
March, 2020
Available data
176
bam
145
bigWig
131
bed narrowPeak
83
bigBed narrowPeak
63
tsv
17
bed broadPeak
17
bigBed broadPeak
11
bed bed3+
6
fastq
6
tagAlign
3
hic
2
bedpe bed3+
1
tar
Organism
63
Homo sapiens
Biosample type
52
cell line
11
tissue
Organ
462
connective tissue
413
pancreas
389
adipose tissue
167
liver
157
heart
151
epithelium
63
blood vessel
63
vasculature
58
bone element
56
artery
18
kidney
15
brain
14
embryo
7
limb
5
eye
5
musculature of body
5
nerve
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
63
AMP
Genome assembly (visualization)
53
GRCh38
53
hg19
Lab
63
AMP-T2D consortium
audit.ERROR.category!
inconsistent control
files.file_type!
vcf
month_released!
July, 2019
BIOSAMPLE
ASSAY
63 results
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total RNA-seq
single cell RNA-seq
pCHi-C
cell line
smooth muscle cell of the coronary artery
52
tissue
aorta
1
4
1
pulmonary artery
2
ascending aorta
1
coronary artery
1
tibial artery
1
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