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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
410
ChIP-seq
Assay category
410
DNA binding
Target of assay
241
transcription factor
166
histone
166
histone modification
103
broad histone mark
66
recombinant protein
63
narrow histone mark
40
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
313
November, 2017
210
June, 2019
189
October, 2019
142
August, 2017
133
May, 2021
106
August, 2021
97
May, 2019
73
November, 2018
65
April, 2019
65
February, 2023
46
September, 2018
45
December, 2017
45
October, 2018
40
May, 2024
38
May, 2022
37
November, 2019
29
December, 2018
27
May, 2020
23
February, 2021
21
January, 2019
16
February, 2018
12
October, 2017
7
July, 2019
5
September, 2017
3
March, 2020
2
November, 2020
Available data
512
bam
431
bigWig
410
bed narrowPeak
409
bigBed narrowPeak
324
fastq
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
410
Homo sapiens
Biosample type
249
cell line
151
tissue
10
primary cell
Organ
249
liver
89
brain
43
vasculature
41
blood vessel
15
heart
8
epithelium
6
limb
6
musculature of body
4
kidney
3
artery
1
pancreas
Project
410
AMP
Genome assembly (visualization)
376
GRCh38
356
hg19
Lab
410
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
10
missing controlled_by
Audit category:
19
inconsistent control read length
4
inconsistent control run_type
audit.ERROR.category!
inconsistent control
BIOSAMPLE
ASSAY
410 results
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Clear Filters
ChIP-seq
cell line
HepG2
249
tissue
layer of hippocampus
16
ascending aorta
13
temporal lobe
13
angular gyrus
12
caudate nucleus
12
+ See 12 more…
primary cell
kidney epithelial cell
4
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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